BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E05SP1|AL425707
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig147 1326 0.0
>3x_Contig147
Length = 1050
Score = 1326 bits (666), Expect = 0.0
Identities = 679/686 (98%)
Strand = Plus / Plus
Query: 1 gttatgtgatgatgaagctgaagaaccaattgaatccaaatgccatcataggttttgtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gttatgtgatgatgaagctgaagaaccaattgaatccaaatgccatcataggttttgtcg 424
Query: 61 cctctgcatcaacgaatatattgattctttcatggcagatgaaaaaaaactaacatgtym 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cctctgcatcaacgaatatattgattctttcatggcagatgaaaaaaaactaacatgtcc 484
Query: 121 ggtatgtyacattggactcagtatcgatttacaacaacaagctcttgaagttgatgaaga 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ggtatgtcacattggactcagtatcgatttacaacaacaagctcttgaagttgatgaaga 544
Query: 181 actattcaaaaagcaaagtattgtcagttggttaaaaatgggaggtaaatggaggtcctc 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 545 actattcaaaaagcaaagtattgtcagtcggttaaaaatgggaggtaaatggaggtcctc 604
Query: 241 cactaagattgaggctttggttgaggagttatacaacttgagaagtgacaagcgcacgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cactaagattgaggctttggttgaggagttatacaacttgagaagtgacaagcgcacgat 664
Query: 301 caagttgattgtcttttcccaattcacatcaatgttagatcttgttgaatggagattaaw 360
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caagtcgattgtcttttcccaattcacatcaatgttagatcttgttgaatggagattaaa 724
Query: 361 acgtgcaggtttccaaacagttaaattgcaaggcagtatgactcccactcaaagagatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 acgtgcaggtttccaaacagttaaattgcaaggcagtatgactcccactcaaagagatca 784
Query: 421 aacaattaaatattttatggagaatatccattgtgaggttttcttagttagtttgaaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aacaattaaatattttatggagaatatccattgtgaggttttcttagttagtttgaaagc 844
Query: 481 tggtggtgtggctcttaacttatgtgaagcttcgcaggtgttcatcttagacccatggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 tggtggtgtggctcttaacttatgtgaagcttcgcaggtgttcatcttagacccatggtg 904
Query: 541 gaaccccagtgttgaatggcagagtggtgatagagttcatagaattggtcaattccggcc 600
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 905 gaaccccagtgttgaatggcagagtggtgatagagtccatagaattggtcaattccggcc 964
Query: 601 agtgaaaattacaagattctgtattgaagatagcatagagtccagaattatcgaacttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 agtgaaaattacaagattctgtattgaagatagcatagagtccagaattatcgaacttca 1024
Query: 661 agaaaagaaggctagcatgattcatg 686
||||||||||||||||||||||||||
Sbjct: 1025 agaaaagaaggctagcatgattcatg 1050
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6600
Number of Sequences: 1807
Number of extensions: 6600
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)